<infile> | Input file |
[<outfile>] | Output file |
[rot=<alt,az,phi>] | Rotation in EMAN convention |
[trans=<dx,dy,dz>] | Translate (before rotation) |
[posttrans=<dx,dy,dz>] | Post-translation |
[centeratoms] | Center based on the mean atom position |
[centerelec] | Center based on the center of electron charge |
[centermass] | Center based on the center of mass |
[animorph=<n>,<apix>,<vecfile>] | This will use a morph vector file (segment3d) to morph atom positions |
[apix=<A/pix>] | multiply trans by apix |
[split] | Split file at TER records. Results imperfect. |
[include=[helix,sheet,other] | [include=[helix,sheet,other]] |
[chains=<chainltr>] | eg - "ABO", for extracting a portion of a complex |
Description
Simple program for manipulating PDB files in the EMAN convention
EMAN Manual page, generated Wed Feb 18 10:51:32 2009