[stack=<input images>] | An image file containing all images to be classified |
[list=<input images>] | A text file with a list of single image filenames |
[classes=<#>] | Number of classes to generate. Default is 4. |
[average=<prefix>] | Make averages of each class and save them to prefix.#.mrc |
[clsfiles] | Generate cls* files |
[listout=<file>] | Outputs a text file containing a list: <class> <ptcl #> <compare to mean> |
[nosingle] | This will try to reject classes with only one member at each step |
Description
Simple k-means classifier for 2D or 3D images. Images must be prealigned.
This doesn't use MSA or any other data reduction technique. It's just a
simple classifier.
WARNING: The entire set to be classified must fit into memory
EMAN Manual page, generated Wed Feb 18 10:51:32 2009