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Bug #1134
closedCan not select "manual" as preset in appionLoop functions when there are other presets in the session
Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
01/12/2011
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 2.0.0
Show in known bugs:
No
Workaround:
Description
The session is 10nov03j and I was trying to run ACE2 on the images.
http://cronus3.scripps.edu/betamyamiweb/processing/runAce2.php?expId=8193
"manual" or "all" are not available presets.
Updated by Anchi Cheng over 13 years ago
- Subject changed from only one preset available for session 10nov03j to Can not select "manual" as preset in appionLoop functions when there are other presets in the session
- Status changed from New to In Code Review
- Target version set to Appion/Leginon Future Version
- Affected Version changed from Appion/Leginon 2.1.0 to Appion/Leginon 2.0.0
- Show in known bugs changed from No to Yes
"manual" is not really a preset in Leginon but a case in which there is no preset reference so the query for presets don't give it back.
r15273 fix the bug with a special search.
To allow the selection in myamiweb:
- myamiweb/inc/leginon.inc add a function to check specifically whether there are manual images taken in the session
- myamiweb/processing/inc/processing.inc uses the above function to add to the preset selection when manual images are included in the session
To allow manual as an option in appion script:
- appion/appionlib/apDatabase.py use the different method to search for manual images
Updated by Anchi Cheng over 13 years ago
- Assignee changed from Anchi Cheng to Lauren Fisher
You can assign back to Anna-Clare to test.
Updated by Lauren Fisher about 13 years ago
- Status changed from In Code Review to In Test
- Assignee changed from Lauren Fisher to Anna-Clare Milazzo
Updated by Anchi Cheng over 8 years ago
- Show in known bugs changed from Yes to No
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