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Bug #1245

closed

subtomomaker.py uses wrong full tomogram binning

Added by Anchi Cheng about 13 years ago. Updated about 12 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Anchi Cheng
Category:
-
Target version:
Appion/Leginon 2.2.0
Start date:
03/17/2011
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

Description

cause an out of range error on the center of the subtomogram trimming

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 #1

Updated by Anchi Cheng about 13 years ago

  • Target version set to Appion/Leginon 2.2.0

fixed in r15511 might need to go into branch 2.1 as it is a fatal bug if the script is used to create subtomogram

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 #2

Updated by Anchi Cheng about 13 years ago

Left a cause to use the aligner bin in case I have not thought of something that causes full tomogram to have no binning. Will not close this bug until I have a chance to run full test of the tomography pipeline.

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 #3

Updated by Amber Herold about 12 years ago

Anchi, do you think you will have a chance to run a full tomography test in the next few days?

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 #4

Updated by Anchi Cheng about 12 years ago

  • Status changed from Assigned to Closed

tested on 12mar26c/tomo/tiltseries2/full3/subtomo_pick24

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