Feature #1557
closedbreak up makestack2.py to extract particledata from images and making stack
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Description
Want to create a base class that only extract particledata according to all the criteria of the current makestack2.py so that we can use them for other kind of particle processing.
Updated by Anchi Cheng about 12 years ago
- Status changed from Assigned to In Code Review
- Assignee changed from Anchi Cheng to Gabriel Lander
r16337 added apParticleExtractor.py to appionlib and move all image and particle elimination functions there.
Gabe, I assign to you to code-review since you last worked on it. If you can't do it, assign it to someone else.
Assign Lauren to test since I didn't test the helical stack making.
Updated by Gabriel Lander about 12 years ago
- Status changed from In Code Review to In Test
- Assignee changed from Gabriel Lander to Lauren Fisher
Anchi, this all looks good - great work. It's about time we started breaking up this huge function into more manageable components. The only thing I did was to make a small "getCS" function inside makestack, since we keep doing it over and over. Should be ready for testing.
r16352
Updated by Amber Herold about 12 years ago
Lauren, do you think you will get a chance to test this in the next few days? if not, I'll assign to someone else. Getting ready for 2.2 release...
Updated by Lauren Fisher about 12 years ago
- Status changed from In Test to Closed
I ran it on Guppy with various parameters and everything tested fine for me. Looks like its good to go!