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Bug #2542

closed

targets adjustment causes relative target drift on versions of parent image

Added by Anchi Cheng over 10 years ago. Updated over 6 years ago.

Status:
Closed
Priority:
Normal
Category:
-
Start date:
10/01/2013
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:

Description

This is obvious only when many versions of the same parent image are taken due to strong drift or the use of all ancestors for adjustment.

For example, if queuing is one for both "Hole Targeting" and "Exposure Targeting" and the target adjustment of "Exposure" node use all ancestors for adjustment.

Actions #1

Updated by Anchi Cheng over 10 years ago

  • Status changed from Assigned to In Test
  • Assignee changed from Anchi Cheng to Dmitry Lyumkis

r17923 should fix this. The parent image derived from the target input is not necessary the most recent version of the image with multiple queuing and target transformation. On the other hand the researchTarget function in targethandler.py always returns the last version target and parent image. As a result, the matrix created and target to be transformed are not properly matched.

Melody/David have used this on 13oct01d from my sandbox

Dmitry,
when you run your session with betaleginon, check the location of the target markers of different versions of sq images in myamiweb. If you have a drifting grid so that sq image drifts and the target markers move with it, then this is fixed.

Actions #2

Updated by Dmitry Lyumkis over 10 years ago

Anchi, I have not experienced this, but will look out for it next time I'm collecting data.
Dmitry

Actions #3

Updated by Sargis Dallakyan over 6 years ago

  • Status changed from In Test to Closed
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