Bug #3033: jahc finder error when template is larger than image - Leginon - Electron Microscopy Group

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Bug #3033

closed

jahc finder error when template is larger than image

Added by Anchi Cheng about 9 years ago. Updated over 6 years ago.

Status:

Closed

Priority:

Normal

Assignee:

Anchi Cheng

Category:

Target version:

Appion - Appion/Leginon 3.3

Start date:

03/31/2015

Due date:

% Done:

Estimated time:

Affected Version:

Appion/Leginon 3.1.0

Show in known bugs:

Yes

Workaround:

use a smaller template

Description

Got this with a 500 default template scaling on an 512 image

Traceback (most recent call last):
  File "/Users/acheng/myami/leginon/gui/wx/JAHCFinder.py", line 181, in onTestButton
    self.node.correlateTemplate()
  File "/Users/acheng/myami/leginon/jahcfinder.py", line 132, in correlateTemplate
    self.hf.create_template()
  File "/Users/acheng/myami/leginon/jahcfinderback.py", line 193, in create_template
    template[offset[0]:offset[0]+origshape[0], offset[1]:offset[1]+origshape[1]] = im2
ValueError: could not broadcast input array from shape (595,595) into shape (42,42)
Traceback (most recent call last):
  File "/Users/acheng/myami/leginon/gui/wx/JAHCFinder.py", line 181, in onTestButton
    self.node.correlateTemplate()
  File "/Users/acheng/myami/leginon/jahcfinder.py", line 132, in correlateTemplate
    self.hf.create_template()
  File "/Users/acheng/myami/leginon/jahcfinderback.py", line 193, in create_template
    template[offset[0]:offset[0]+origshape[0], offset[1]:offset[1]+origshape[1]] = im2
ValueError: could not broadcast input array from shape (536,536) into shape (12,12)