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Feature #4263

closed

Port DBSCAN Automasker to Appion

Added by Carl Negro almost 8 years ago. Updated over 6 years ago.

Status:
Won't Fix or Won't Do
Priority:
Normal
Assignee:
Carl Negro
Category:
-
Target version:
Appion/Leginon 3.3
Start date:
06/17/2016
Due date:
% Done:

0%

Estimated time:

Description

Requires the sklearn python package, which requires a virtual environment, which is a minor hassle. Still worth it for future development, as sklearn has a lot useful features. I'll compile the installation instructions into a wiki page very soon.

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 #1

Updated by Carl Negro over 6 years ago

  • Status changed from In Test to Won't Fix or Won't Do

Closing this because there are better automasking programs we could implement:

https://academic.oup.com/bioinformatics/article/33/23/3824/4076055

https://github.com/tbepler/topaz

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