Project

General

Profile

Actions

Feature #4514

closed

transfer ctf results from non dose-weighted images to dose-weighted ones

Added by Anchi Cheng over 7 years ago. Updated over 6 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
10/08/2016
Due date:
% Done:

0%

Estimated time:

Description

Since ctf fits better with non-dose-weighted images, the transfer is useful


Related issues 1 (0 open1 closed)

Related to Appion - Feature #5159: Check all sibling images for CTF infoClosedGabriel Lander08/18/2017

Actions
Actions #1

Updated by Anchi Cheng over 7 years ago

First iteration of the script committed. Inputs are presets from and to and ctfrunid. bestdb option is possible but will not match ctf run parameters, and not yet tested.

Example

transferCtfResults.py --projectid=4 --session=16oct04c --expid=19 --preset=ex-a-DW --frompreset=ex-a --ctfrunid=1 --runname=ctffind4run1T --rundir=/nis/ucsd-02/appion/16oct04c/ctf/ctffind4run1T --commit --description='transfer from ex-a to ex-a-DW'

Actions #2

Updated by Anchi Cheng over 7 years ago

Also add viewer status transfer. and --sort option to choose how to choose bestdb. In particular, resPkg is the resolution fitting is "good" to in ctffind4 (similar to res50) or gCtf (EPA resolution).

Actions #3

Updated by Anchi Cheng over 7 years ago

1f65b1e4 fixed a bug introduced earlier and also make image viewer status transfer applied to all images so that hidden status is transferred, too.

Actions #4

Updated by Anchi Cheng over 6 years ago

  • Related to Feature #5159: Check all sibling images for CTF info added
Actions #5

Updated by Anchi Cheng over 6 years ago

With the implementation in Issue #5159. ctf transfer is needed only if ctfrunid is specified and/or if ImaveViewerStatus needs to be transferred.

Actions #6

Updated by Anchi Cheng over 6 years ago

  • Status changed from Assigned to Closed

works.

Actions

Also available in: Atom PDF