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Bug #4585
closedDE20 frame alignment no longer use apDDprocess and database insertion error
Start date:
11/09/2016
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:
Description
session 16nov09b
running DE20 frame alignment, with or without dose compenstion. get same error:
Traceback (most recent call last):
File "/opt/myamisnap/bin/makeDEAlignedSum.py", line 7, in <module>
makeSum.run()
File "/opt/myamisnap/lib/appionlib/appionPBS.py", line 74, in run
self.preLoopFunctions()
File "/opt/myamisnap/lib/appionlib/makeDEAlignedSumLib.py", line 140, in preLoopFunctions
self.dd.setDoseFDriftCorrOptions(self.params)
AttributeError: 'DEProcessing' object has no attribute 'setDoseFDriftCorrOptions'
Updated by Anchi Cheng over 7 years ago
- Status changed from New to Assigned
- Assignee set to Anchi Cheng
- Priority changed from Normal to Immediate
Zhenning, Vankat,
Now that queue is working again you will need to kill your job because of this bug. I am working on it now.
Updated by Anchi Cheng over 7 years ago
- Subject changed from DE20 frame alignment not working to DE20 frame alignment no longer use apDDprocess and database insertion error
Also has error in inserting ApFrameAlignTrajectory. Could not insert array into integer type.
Updated by Anchi Cheng over 7 years ago
- Status changed from Assigned to In Code Review
- Assignee changed from Anchi Cheng to Scott Stagg
c121ea49 fixed these and added MotionCorr style log for myamiweb drift graph tool.
Scott, please check if ApFrameAlignTrajectory change from int to list type make sense to you.
Updated by Anchi Cheng over 5 years ago
- Status changed from In Code Review to Closed
- Target version set to Appion/Leginon 3.3
Assume o.k.
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