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Bug #937
closedappion jobs not working
Status:
Closed
Priority:
High
Assignee:
Christopher Irving
Category:
unknown
Target version:
-
Start date:
10/13/2010
Due date:
% Done:
0%
Estimated time:
Affected Version:
Appion/Leginon 2.1.0
Show in known bugs:
No
Workaround:
Description
I guess you guys are changing things, again? When I try to run manualpicker, it doesn't work. This is what comes up:
/ami/sw/bin/appion manualpicker.py --projectid=252 --preset=en --session=10aug18a --runname=manrun4 --rundir=/ami/data08/appion/10aug18a/extract/manrun4 --no-rejects --no-wait --commit --continue --median=2 --lowpass=15 --highpass=0 --planereg --bin=4 --diam=400 --pixlimit=4.0 --pickrunid=12 --shape=plus
... Time stamp: 10oct13r45
... Function name: manualpicker
... Appion directory: /ami/sw/packages/myami-2.1/appion
!!! WARNING: Using split database
Traceback (most recent call last):
File "/ami/sw/packages/myami-2.1/appion/bin/manualpicker.py", line 615, in ?
imgLoop = manualPicker()
File "/ami/sw/packages/myami-2.1/appion/appionlib/particleLoop2.py", line 108, in init
appionLoop2.AppionLoop.__init__(self)
File "/ami/sw/packages/myami-2.1/appion/appionlib/appionLoop2.py", line 30, in init
appionScript.AppionScript.__init__(self, True)
File "/ami/sw/packages/myami-2.1/appion/appionlib/appionScript.py", line 71, in init
newdbname = apProject.getAppionDBFromProjectId(self.params['projectid'])
File "/ami/sw/packages/myami-2.1/appion/appionlib/apProject.py", line 81, in getAppionDBFromProjectId
projdata = leginon.projectdata.projects.direct_query(projectid)
File "/ami/sw/packages/myami-2.1/sinedon/data.py", line 402, in direct_query
db = connections.getConnection(modulename)
File "/ami/sw/packages/myami-2.1/sinedon/connections.py", line 21, in getConnection
dbconf = dbconfig.getConfig(modulename)
File "/ami/sw/packages/myami-2.1/sinedon/dbconfig.py", line 61, in getConfig
return dict(configs[modulename])
KeyError: 'projectdata'
Exception exceptions.KeyError: 'appiondata' in <bound method manualPicker.__del__ of <__main__.manualPicker object at 0x13b8e750>> ignoredUpdated by Christopher Irving over 13 years ago
- Status changed from New to Closed
- Affected Version changed from Appion/Leginon 2.0.2 to Appion/Leginon 2.1.0
Sinedon.cfg needed to be copied into the new branch directory.
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