Common Features » History » Version 18
Amber Herold, 07/27/2010 10:30 AM
| 1 | 6 | Amber Herold | h1. Image Viewer Overview |
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| 2 | 1 | Amber Herold | |
| 3 | 10 | Amber Herold | h2. Anatomy of an Image Viewer |
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| 5 | 17 | Amber Herold | *Primary Features:* |
| 6 | 11 | Amber Herold | |_.Name|_.Description| |
| 7 | |Project Drop Down List| Projects that you own or have been shared will appear in the list. Select one to view.| |
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| 8 | |Session Drop Down List|Sessions that belong to the currently selected Project will appear in the list. Select one to view.| |
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| 9 | |Image List|The images belonging to the currently selected Session will appear in the Image List. The selected image will appear in the Image View. The total number of images is displayed at the top of the list.| |
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| 10 | |Image View|The selected image will be displayed in the Image View. The Image View may be configured using the Image Tools controls located directly above the Image View.| |
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| 11 | |Image Tools|Includes many basic image manipulation features such as filtering and Fourier Transform. Read the [[Image Tools]] manual page for more information. | |
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| 12 | 1 | Amber Herold | |
| 13 | 17 | Amber Herold | *Image Viewer Screen:* |
| 14 | 10 | Amber Herold | !ImageViewerScreenMarked.jpg! |
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| 18 | 1 | Amber Herold | h2. Chose the right viewer for the job |
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| 20 | 17 | Amber Herold | *Image Viewer applications available in Appion and Leginon web tools:* |
| 21 | 7 | Amber Herold | |_.Viewer Name|_.Viewer Features| |
| 22 | |[[Image Viewer]] | provides a single image pane| |
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| 23 | |[[2 Way Viewer]] | provides 2 image panes for viewing the same mrc file in different ways side by side| |
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| 24 | |[[3 Way Viewer]] | provides 3 image panes for viewing the same mrc file in different ways | |
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| 25 | |[[Dual Viewer]] | provides 2 image panes for viewing separate mrc images side by side| |
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| 29 | 9 | Amber Herold | h2. Features available with all viewers |
| 30 | 6 | Amber Herold | |
| 31 | h3. From the header buttons |
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| 33 | 5 | Amber Herold | # View an aggregate summary of all the images in a session |
| 34 | 1 | Amber Herold | # Launch the Appion Image processing application |
| 35 | # Launch a tool to create jpegs of all or many of the images in a session |
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| 36 | 6 | Amber Herold | |
| 37 | 18 | Amber Herold | *Image Viewer Header Buttons:* |
| 38 | !http://emg.nysbc.org/attachments/452/ImageViewerHeader.png! |
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| 40 | 6 | Amber Herold | h3. From the Image Tools panel |
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| 42 | 2 | Amber Herold | # View the mrc images associated with Projects and Sessions |
| 43 | # Adjust image properties |
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| 44 | 1 | Amber Herold | # Mark images as _hidden_ or _exemplar_ |
| 45 | # View a sideshow of the images in a session |
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| 46 | # Download individual images in mrc, tiff or jpeg format |
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| 47 | # View a detailed image report including mrc header information and calibrations |
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| 48 | # View the Fourier Transform of the image |
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| 49 | # View ACE graphs |
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| 50 | # View Particle Picks |
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| 51 | # View Leginon MSI focus and acquisition targets |
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| 52 | # Overlay a scale ruler |
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| 55 | 17 | Amber Herold | *Features of the Image Tools Panel:* |
| 56 | 16 | Amber Herold | !http://emg.nysbc.org/attachments/144/ImageToolsMarked.JPG! |
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| 58 | h3. Dequeue Tool: !http://emg.nysbc.org/attachments/289/deq_bt_on.gif! |
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| 61 | Used to remove queued targets on the image shown in the viewer and queued targets chosen on its direct descendant images. Clicking on it gives the number of active queued targets and the user can choose to remove them from the active list. |
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| 64 | 1 | Amber Herold | |
| 65 | ______ |
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| 67 | [[Image Tools|Image Tools >]] |
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| 69 | ______ |