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Install Grigorieff lab software » History » Version 16

Sargis Dallakyan, 12/14/2017 10:24 AM

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h1. Install Grigorieff lab software
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The Grigorieff lab at Brandies provides several individual programs that are used in Appion. See their "main software page":http://emlab.rose2.brandeis.edu/software to download their software
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h2. Software used in Appion:
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* "Frealign":http://emlab.rose2.brandeis.edu/frealign — Refinement of 3D reconstructions using single-particle images
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* "CTFfind and CTFtilt":http://emlab.rose2.brandeis.edu/ctf — CTF estimation
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** *NOTE:* Once installed, you must rename ctffind to ctffind4 and ctftilt.exe to ctftilt64.exe or create symbolic links. Otherwise, you will receive an error that ctffind64.exe was not found during ctf estimation.
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* "Signature":http://emlab.rose2.brandeis.edu/signature — Particle selection from micrographs
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** *NOTE:* Once installed, you must rename signature.exe to signature64.exe or create symbolic links. Otherwise, you will receive an error that signature64.exe was not found.
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* "Rmeasure":http://emlab.rose2.brandeis.edu/rmeasure — Resolution measurement
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[[Install UCSF Chimera|< Install UCSF Chimera]] | [[Compile FindEM|Compile FindEM >]]
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