Useful shell commands » History » Version 4
Amber Herold, 09/23/2011 11:10 AM
1 | 1 | Amber Herold | h1. Useful shell commands |
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3 | h3. check the status of a job |
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5 | # ssh to the processing server |
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6 | # <pre>qstat -au YOUR_USER_NAME</pre> |
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7 | # will list your jobs |
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9 | h3. make a folder writable |
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11 | <pre> chmod -R g+rw eman_recon14</pre> |
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14 | h3. kill a process |
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16 | # Log into the machine it is running on |
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17 | <pre>ssh fly</pre> |
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18 | # Look for processes with your user name |
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19 | <pre>ps -ef |grep [your_username]</pre> |
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20 | # Kill the process using the number in the first column after your username |
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21 | <pre>kill [process id]</pre> |
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22 | # If the process was a copy, remove the destination folder |
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23 | <pre>rm [destination folder]</pre> |
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24 | # list system stats |
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25 | <pre>top</pre> |
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26 | 2 | Amber Herold | |
27 | 4 | Amber Herold | h3. Kill a job running through the job manager |
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29 | 3 | Amber Herold | * use *qdel* <job number> |