Version220 » History » Version 10
Amber Herold, 11/17/2010 08:11 AM
1 | 1 | Amber Herold | h1. Appion/Leginon 2.2 |
---|---|---|---|
2 | |||
3 | 5 | Amber Herold | Appion/Leginon 2.2 will focus on the Extensibility of Appion. |
4 | 1 | Amber Herold | The goal is to make it easy for outside labs to add new processing modules to the Image Pipeline. |
5 | 5 | Amber Herold | Time Frame ~6 months. Release by June 2011. |
6 | 1 | Amber Herold | |
7 | |||
8 | 10 | Amber Herold | "View the 2.2 Deliverable status":http://emg.nysbc.org/issues?query_id=26 |
9 | 5 | Amber Herold | |
10 | # *Automated testing* #1005 (Amber) (6 weeks) |
||
11 | ## Develop unit tests where applicable #1006 |
||
12 | ## Develop test scripts where possible #1007 |
||
13 | ## Look into automated GUI test apps #1008 |
||
14 | ## Static testing for code standards? #1009 |
||
15 | ## Establish a permanent test data set in Data00 |
||
16 | |
||
17 | # *Expand Auto-Installer* #1015 (Christopher, Eric) |
||
18 | ## multiple servers #1016 |
||
19 | ## multiple platforms #1017 - Mac (highest priority), Fedora, Suse, Ubuntu (Eric) |
||
20 | ## more options (Advanced vs Novice user) #1018 |
||
21 | ## yum, rpm ? #1019 |
||
22 | ## add processing packages to installer (spider, frealign, eman) |
||
23 | |
||
24 | # *try adding modules* (Amber, Lauren?) |
||
25 | ## Add new version of Chimera to existing code to learn what is involved #82 #25 |
||
26 | ## Chose other modules to add after code changes |
||
27 | ## See if StokesLabProcedure will integrate their stuff as a Beta test |
||
28 | |
||
29 | # *Refactor code* (Eric, Amber) |
||
30 | ## Identify trouble spots |
||
31 | ## Focus on readability and modularity |
||
32 | 1 | Amber Herold | ### Reduce terminology overloading |
33 | 5 | Amber Herold | ### Work toward a plugin architecture (look for generalizations, api) |
34 | |
||
35 | # *Create a developers tutorial* #1022 |
||
36 | ## Add a developers tab to the appion website with links to all the resources available #1021 |
||
37 | ## Define coding standards (#10) |
||
38 | ### python doc string viewer/editor (#162) |
||
39 | ### Edit several key files (such as often copied ones) to use standards rigorously as samples #1012 |
||
40 | ### PHP standards doc #1013 |
||
41 | ### python standards doc #231 |
||
42 | |
||
43 | # *PHP_MRC* (#669 #680 #314) (Jim & Eric) |
||
44 | |
||
45 | # *Features for public cluster* (release with 2.1.1) |
||
46 | ## Users need to be able to run imageuploader remotely. (#274) |
||
47 | ## Need to be able to define max number of procs per node for each processing host - Advanced version (#366) |
||
48 | ## Add single user sign-on functionality for SDSC roll-out (#1010) |
||
49 | ## Investigate how data will move between AMI and SDSC (#1011) |
||
50 | ## Having a different password for the imageviewer login and the cluster login is confusing. #364 |
||
51 | ## Create Appion job submit agent server #1023 (Eric) |
||
52 | ### One central job submit point and user (optional). |
||
53 | ### Detail report time, user, status, for each job. |
||
54 | |
||
55 | |
||
56 | # *Complete Appion Wrapper* (#692 #675 #676) |
||
57 | |
||
58 | # *Better error reporting* |
||
59 | ## Biggest problem is jobs management which could be helped with an agent |
||
60 | ## Show jobs that are errors (#603) |
||
61 | ## Create an error log (#75) |
||
62 | ## Remote cluster recons should not return as done if job failed (#531) |
||
63 | |
||
64 | # *Improve help tools* |
||
65 | ## Add links to redmine wiki help pages to appion pages (#666) |
||
66 | ## Add pop up dialogs to report pages as well (#516) |
||
67 | ## Image viewer tool tips |
||
68 | |
||
69 | |||
70 | |||
71 | h3. Moved to low priority: |
||
72 | |||
73 | # *Create or use an object-relational mapping for PHP* #1020 (Eric) |
||
74 | ## Look into Zend library |
||
75 | ### "example":http://framework.zend.com/manual/en/zend.db.select.html |
||
76 | |
||
77 | # *Discuss a strategy to modify database schema without effect external developers.* |
||
78 | ## we will wait and address this when someone is ready to make a change. |
||
79 | |
||
80 | # *clean up web interface* |
||
81 | ## Remove inconsistencies in web interface (#41 #670) |
||
82 | ## Add session name to window so that window are not reloaded from another session (#512) |
||
83 | ## Remove select project box in getproject page. (#14) |
||
84 | ## Implement sorting algorithm into project management tool. (#13) |
||
85 | ## Job Status updates missing on some tools (#994) |
||
86 | ## Reorganize the last column in the view project page. (#15) |
||
87 | |
||
88 | # *Leginon* |
||
89 | ## Feature to measure focus change in a random direction. (#226) |
||
90 | ## import preset by searching for session that uses an application (#654) |
||
91 | ## Allow averaging of multiple focus measurements (#225) |
||
92 | ## Leginon image viewer should cache the FFT images as well. (#217) |
||
93 | ## target queue editor (#214) |
||
94 | |
||
95 | # *misc* |
||
96 | ## Data Location tool-find data and push it to external drive (#954) |
||
97 | ## Snapshots of projection views for uploaded models. (#857) |
||
98 | ## Put variables from config.php into the database (#699) |
||
99 | |||
100 | 1 | Amber Herold | |
101 | |||
102 | [[appion:Version220|<Edit this page>]] |