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Direct assignment of frame fliprotation in dmsemcfg for Gatan K2 and K3 cameras¶
Since there are reports of disagreement of camera frame configuration vs sum unaligned image returned to Leginon, and the behavior changes with too many factors, a direct overwrite is now possible by making the assignment within dmsem.cfg
To do this, copy these from pyscope/dmsem.cfg.template to your dmsem.cfg used by K2/K3.
OVERWRITE_FRAME_ORIENTATION =False FRAME_FLIP_TO_OVERWRITE_WITH = True
Shown above is the default. You should test it out. If that gives you a flip in the aligned image through Appion frame alignment, Change this to
OVERWRITE_FRAME_ORIENTATION =True FRAME_FLIP_TO_OVERWRITE_WITH = False
Updated by Anchi Cheng about 4 years ago · 1 revisions