Leginon

h1. Operation

h2. Enter Grid Information through Project Web Form

* Go to http://your_host/projectdb/ on a web browser.

* Select the Grid Tray Panel.

* Click on upload grids/tray

* Follow the format and instruction to create an upload file with grid information with labels unique to the project and location unique to the grid box to be inserted.

h2. Set up robot and grids in its tray matching your entry

*  Leginon does not know if you switch grids and pretend!

h2. Start Leginon

*  This include general scope alignment and preset alignement

h2. 1st Pass Screening

*  Starting node is the Robot node

*  Select grids in the Robot node and click "Start". You might need to click "Continue". too. It is a bug that is hard to remove without causing other problems.

*  The grids are imaged in the order of the grid selection.

*  Use the first grid to optimize square finding and raster sizing and angles and then remove the user verification for full automation.

h2.  Evaluation

*  Do not forget to transform if you modify the targets.

h2.  2nd Pass Screening

*  Starting the sequence at "2nd Pass Targeting". If no modification is needed off the last step, just "Submit" the targets to initiate the process which will pause to wait for confirmation that the robot is ready to start.

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[[2nd Pass application|< 2nd Pass application]] 

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