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Anonymous datasets

Note: Not all sets are currently available. Older sets are in the process of being retrieved from archives and will be available soon.

All datasets below are available in the NRAMM Anonymous datasets viewer.

  • You can also click on the Session Name below (e.g. 09apr14b) to pop up a web viewer to browse the images. See Leginon viewer help for more information on viewing these images. Note that you will need to login once as an Anonymous user before you can access the datasets. Images can be downloaded one-by-one from the Leginon viewer or as an entire set using the dbemwiz.jar tool and selecting the appropriate experiment names (e.g. 05oct20a).
  • Summary information may be viewed by selecting the Summary option at the top of the viewer window which will pop up a new window.

List of datasets available to the anonymous user:

Session Name Leginon Description Wiki link Reference
09apr14b 50S Ribosome, 100k particles Ab_initio_model_datasets Voss et al. 2010
09mar04b 50S Ribosome on Pt Coated C_Flats Ab_initio_model_datasets Voss et al. 2010
09feb18c 50S Ribosome tomography Ab_initio_model_datasets Voss et al. 2010
09feb12b 50S Ribosome RCT data Ab_initio_model_datasets Voss et al. 2010
06jul12a GroEL at 100kX, 120KeV 06jul12a_GroEL_dataset Stagg et al. 2008
06apr27c TMV 40mg/ml TMV_datasets unpublished
06mar09a GroEL at 100kX 06jul12a_GroEL_dataset Stagg et al. 2008
05may19a GroEL at 50kX, 250,000 particles 05may19a_GroEL_dataset Stagg et al. 2006
05oct20a P22 mature virion P22_datasets Lander et al. 2006
05oct27b P22 mature virion P22_datasets Lander et al. 2006
05nov11a P22 mature virion P22_datasets Lander et al. 2006
05dec13a P22 mature virion P22_datasets Lander et al. 2006
07mar29b Lambda virion Lambda_virion_datasets Lander et al. 2008
07apr02a Lambda virion Lambda_virion_datasets Lander et al. 2008
07apr20d Lambda virion Lambda_virion_datasets Lander et al. 2008
07aug15c Lambda virion Lambda_virion_datasets Lander et al. 2008
07aug22a Lambda virion Lambda_virion_datasets Lander et al. 2008
07sep23a Lambda virion Lambda_virion_datasets Lander et al. 2008

Former public datasets from old Leginon database:

Session Name Description Wiki link Reference
03oct09b GroEL control qfoil (p11 log book) GroEL Dataset I
02oct09a Hemocyanin KLH Dataset II
01nov26b first look at hemocyanin, 2nd grid KLH Dataset I Zhu et al. 2004

Possible future additions after publication:

  • Poliovirus, 09sep25a
  • CNV, 10apr19a
  • More of test-bed GroEL datasets, e.g. 200kV
  • 30S time-series assembly.

Updated by Sargis Dallakyan over 9 years ago · 1 revisions