Feature #787
closed
Allow importing of old tilt alignment parameters in new tilt alignments
Added by Neil Voss almost 14 years ago.
Updated about 12 years ago.
Category:
Python scripting
Description
will add --import-align to the python.
Arne to use the ApTiltPickerHelical.py instead of ApTiltPicker.py to get this to work.
in your appion bin folder, mv -v ApTiltPickerHelical.py ApTiltPicker.py
- Target version changed from Appion/Leginon 2.1.0 to Appion/Leginon 2.2.0
- Status changed from Assigned to In Code Review
- Assignee changed from Neil Voss to Amber Herold
- Status changed from In Code Review to In Test
- Assignee changed from Amber Herold to Arne Moeller
Neil, in the following files it looks like a couple of lines were still being worked on:
source:trunk/appion/bin/ApTiltPicker.py#L1239
source:trunk/appion/bin/ApTiltPickerHelical.py#L1340
def onFitAll(self, evt):
#self.onUpdate(None) <- not clear why this is no longer needed but remains in code...
if False and (len(self.getArray1()) < 5 or len(self.getArray2()) < 5): <- not clear why this has been removed with "if False".
It actually looks like this function is never even called....
- Assignee changed from Arne Moeller to Neil Voss
works fine. Sometimes it crashes for reasons I don't really know. If it crashes it will crash always at the same image pair. After rejecting those images it works fine. I was not able to find any relation between the image pair and why it crashed (f.e. weird or no particle picks)
- Status changed from In Test to Closed
I've created a new issue with a workaround (#1692) for the bug Arne found so that I can close out this feature for 2.2 release.
Also available in: Atom
PDF