Feature #995
closed
integrate contourpicker into appion
Added by Anchi Cheng over 13 years ago.
Updated about 12 years ago.
Category:
Python scripting
Description
sizing and contour application developed at NIS.
- Status changed from New to Assigned
r14984 added the original files into appion
r14988 clean up import and convert mixed spaces/tab to all tab. also put contourdata.py class typemaps to appiondata.py and delete contourdata.py
- % Done changed from 0 to 20
r14993 removed randomorder param in manualpicker.py because shuffle in appionLoop2.py does the same thing.
r14994 made ContourPicker a subclass of manualpicker.ManualPicker and removed redundent codes.
r15038 makes the related script into subclasses of appionScript and use appiondata format for the database. All functions work. Next is to clean up Tube/Circle tools since they are not used any more.
r15112 put contourpicker on appionweb as object tracer
- clean up contour picker.py gui and retain the ability to pick labeled particle.
- myamiweb/runContourPicker.php is added based on runManualPicker.php.
- processing menu is changed to reflect that we may not be picking particles but objects ( such as a helix and a traced blob)
r15311 default auto-contour display so that it is easier to delete in contourpicker.py and abort contourTextFileGenerator.py without except when it is clicked while the first image is displayed since there is no selection run saved in database yet.
- Status changed from Assigned to Closed
This has been used by Joyce for a long time now.
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