Electron Microscopy Group

05/18/2011

05:25 PM Leginon Code Development: RE: Appion code for Jensen lab

thanks!
http://your_webserver/myamiweb/tomo/index.php?tid=45958 works well in my test.
But it's still not very ... Jane Ding

05:15 PM Leginon Feature #1303 (Closed): allow tomography index.php to be reached by specified tilt series

It works in my test. Thanks, Jane Ding

05/17/2011

02:54 PM Leginon Code Development: RE: Appion code for Jensen lab

Hi Anchi,
A couple of more questions:
1. in tomoraptor.py, how do I obtain the session number and description... Jane Ding

05/12/2011

05:17 PM Leginon Code Development: Appion code for Jensen lab

Hi Anchi, remember you helped to write a uploadJaneTomo.py for me during my last visit in SD? It demonstrates how to... Jane Ding

05/11/2011

04:50 PM Leginon Code Development: question on tomoraptor.py in Appion

In the current tomoraptor.py call, does it test whether a tilt series is "good" or not before submitting it to Rapto... Jane Ding

04/21/2011

11:22 AM Leginon Code Development: RE: Appion question

Another question: After RAPTOR generates the 3D tomogram, what is the web download link to the tomogram file? I did ... Jane Ding

09:45 AM Leginon Code Development: RE: Appion question

Thanks Anchi.
After RAPTOR generates a 3D tomogram, we would like to generate a movie (going through slices, smaller... Jane Ding

04/18/2011

04:54 PM Leginon Code Development: RE: Appion question

Thanks Anchi. Some more questions:
1. By "upload the metadata of the reconstructed 3D tomogram to Appion database... Jane Ding

04/15/2011

04:11 PM Leginon Code Development: Appion question

Under Appion -> Image Viewer -> Processing:
Under left menu "Tomography", what does "Upload tomogram" do?
Thanks,
Jane Ding

03/23/2011

01:22 PM Leginon Software Installation: microscope computer - Windows XP ok?

FEI is suggesting to upgrade our microscope Windows from 2000 to XP. Would like to make sure Leginon runs on XP. Thanks, Jane Ding