Leginon

This is a common question in the testing stage of the installation. You will need these for diagnose problem with the run.

You will find the script log in the Output Directory that you specify in the webpage such as the screenshot
for Dog Picker.

http://emg.nysbc.org/projects/appion/wiki/Dog_Picking

The script log carries the name of the python script it ran from. In the dog picker example, it would be

dogPicker.log

As for the output of the script run, if you use "Just Show Command" running option and copy and paste to your text terminal to run, the log of the running would have scrolled-by and lost. You should pipe it to a file if you want to show it to others. If your installation allows you to submit the job through Torque/PBS, the log file is in the same directory as the
script log and would carry a name that include the runname such as

dogrun1.appionsub.log