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Time between acquisition using Leginon with a Gatan K2 Summit

Added by Christopher Lilienthal over 10 years ago

Hello,

I was wondering if anyone would be able to estimate the time between acquiring "movies" in counted mode and super-resolution mode (If there is any significant difference). We are trying to get a feel for the network bandwidth that could/will be used transferring images from the controlling PC to the storage.

Thanks for any help you may be able to provide,

Chris


Replies (1)

RE: Time between acquisition using Leginon with a Gatan K2 Summit - Added by Anchi Cheng over 10 years ago

For a typical 25 frame movie (and atypical 50 ms frame time so that the exposure time (1.25 s) is not dominant), here are the numbers:

Mode save movie? time (s)
Counted No 3.7
Counted Yes 20.0
Super-res No 11.6
Super-res Yes 42.7

This timing is done with DM 2.30, through the getImage call in pyscope directly on the K2 computer. It does not include transferring of the image to outside Gatan's local 10 GB network and the mrc frame files were saved on its D drive (non SSD).

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