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Bug #3016

closed

need to account for different projection submode orientation for image shift

Added by Anchi Cheng over 9 years ago. Updated about 7 years ago.

Status:
Closed
Priority:
Urgent
Assignee:
Anchi Cheng
Category:
-
Target version:
Appion - Appion/Leginon 3.3
Start date:
02/27/2015
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.1.0
Show in known bugs:
No
Workaround:

Description

For example, LM to SA on FEI microscope and some mags on JEM (3000 to 30000 on JEM2100F, for example)

Related issues 1 (0 open — 1 closed)

Related to Leginon - Feature #3909: account for image rotation in pixel to pixel transformation between magsClosedAnchi Cheng01/26/2016

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 #1

Updated by Anchi Cheng over 9 years ago

r18799 sets PROJECTIOn_MODE_TRANSFORM to True since this is now hard-coded to transform only with JEM-2100f. Will need clean up.

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 #2

Updated by Anchi Cheng over 9 years ago

I realized that image rotation can happen even when within the same project submode when the defocus is high, for example.
r18844 does this. Tested in the case of jem-2100f 3000x to 25000x.

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 #3

Updated by Anchi Cheng about 7 years ago

  • Related to Feature #3909: account for image rotation in pixel to pixel transformation between mags added
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 #4

Updated by Anchi Cheng about 7 years ago

  • Status changed from Assigned to Closed
  • Target version set to Appion/Leginon 3.3

The more flexable solution was provided by refs #3909 in 3.3 version

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