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Bug #3625

closed

wxPython not in CentOS 6.7 yum repository

Added by Anchi Cheng over 8 years ago. Updated over 8 years ago.

Status:
Won't Fix or Won't Do
Priority:
Urgent
Assignee:
Carl Negro
Category:
-
Target version:
Appion - Appion/Leginon 3.2
Start date:
10/05/2015
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:

Description

Need the new package name to fix centosAutoinstallation.py and instruction in wiki

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 #1

Updated by Sargis Dallakyan over 8 years ago

  • Status changed from Assigned to In Test
  • Assignee changed from Sargis Dallakyan to Anchi Cheng

wxPython is EPEL repository and last time I run centosAutoinstallation.py it downloaded and installed EPEL and wxPython. I tested it on fly server that is running CentOS 6.7. For the wiki we have the following pages:

http://emg.nysbc.org/projects/appion/wiki/Download_additional_Software_%28CentOS_Specific%29
http://emg.nysbc.org/projects/appion/wiki/Install_supporting_packages

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 #2

Updated by Anchi Cheng over 8 years ago

  • Assignee changed from Anchi Cheng to Carl Negro

Carl,

Please investigate why emgproc01 did not have wxPython installed. One possibility is that it uses Centos 6.7 but the autoinstallation assumes 6.8. See if you can find a way to resolve this problem for future users, either manually (i.e. user entering the os version) or automatically. Need this before 3.2 release. Thanks.

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 #3

Updated by Carl Negro over 8 years ago

I installed CentOS 6.6 on emgproc01, emgproc02, and emgproc03 and ran 'yum update' to bring the operating system to version 6.7. Although wxPython is listed in the CentOS 6.7 repository, I still had to run 'yum install wxPython' as wxPython would not install automatically after 'yum update' again. I ran

sudo yum -y install \
python-tools python-devel python-matplotlib \
subversion ImageMagick grace gnuplot \
wxPython numpy scipy python-imaging \
gcc-gfortran compat-gcc-34-g77 \
gcc-objc fftw3-devel gsl-devel \
mysql mysql-server MySQL-python \
httpd php php-mysql phpMyAdmin  \
gcc-c++ openmpi-devel libtiff-devel \
php-devel gd-devel re2c fftw3-devel php-gd \
xorg-x11-server-Xvfb netpbm-progs \
libssh2-devel

from the appion complete installation page so we should have all the proper libraries now on these machines.

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 #4

Updated by Anchi Cheng over 8 years ago

  • Status changed from In Test to Won't Fix or Won't Do

Problem was related to CetOS upgrade from 6.6 to 6.7 not keeping EPEL. Won't be a problem on new installation using autoinstaller.

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