Check Cs value match before using Leginon after update » History » Revision 4
Revision 3 (Anchi Cheng, 06/07/2012 01:57 PM) → Revision 4/6 (Anchi Cheng, 06/07/2012 09:17 PM)
h1. Check Cs value match before using Leginon after update Run the following script on any of the computer where you have done the update on. On Linux: <pre> $PYTHONSITEPKG/leginon/cscheck.py </pre> On Windows: <pre> C://Python25/Lib/site-packages/leginon/cscheck.py </pre> You should get a list of microscope where you have saved images on in a Leginon session and the Cs values that you entered using schema-r15653.py. For example, <pre> TEM tecnai1234.Tecnai tecnai1234,Tecnai used in session 12jun07a has Cs value of 2.000e-03 m </pre> Check that against the Cs value in instruments.cfg on the named microscope (tecnai1234 in this case) which is also listed in meters, like this: <pre> [tem] class: tecnai.Tecnai cs: 2.0e-3 </pre> meters. *The two must match. Otherwise Leginon will complain and you may lose all your old calibrations.* ______ [[How_to_Update_from_v21_(Microscope_Windows_Computer)| < How to Update from v2.1 (Microscope Windows Computer) ]] ______