FEI TecnaiTitan installation specifics » History » Version 14
Anchi Cheng, 11/03/2015 10:05 PM
| 1 | 1 | Anchi Cheng | h1. FEI TecnaiTitan installation specifics |
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| 3 | 2 | Anchi Cheng | h2. Extra Package and Installation |
| 4 | 1 | Anchi Cheng | |
| 5 | 12 | Anchi Cheng | {{include(Comtypes_installer)}} |
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| 7 | 1 | Anchi Cheng | |TEM Scripting or Tecnai Scripting|Request this when purchasing the microscope|Required| |
| 8 | |TomMoniker Scripting|Should come with TEM Scripting|Required| |
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| 9 | |Low Dose Server Library|Should come with the microscope if low dose kit was purchased|Required only if you want to use low dose kit with Leginon's Manual Application| |
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| 10 | 2 | Anchi Cheng | |
| 11 | 13 | Anchi Cheng | h3. Run checkcom.py |
| 12 | 2 | Anchi Cheng | |
| 13 | * From a command line window: |
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| 14 | <pre>cd C:\python27\Lib\site-packages\pyscope |
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| 15 | 14 | Anchi Cheng | C:\python27\python.exe checkcom.py</pre> |
| 16 | 2 | Anchi Cheng | |
| 17 | 13 | Anchi Cheng | * The output should at least find typelib for |
| 18 | 2 | Anchi Cheng | <pre> |
| 19 | 13 | Anchi Cheng | TEM Scripting |
| 20 | 2 | Anchi Cheng | </pre> |
| 21 | 13 | Anchi Cheng | and |
| 22 | 10 | Anchi Cheng | <pre> |
| 23 | 13 | Anchi Cheng | TOM Moniker |
| 24 | 2 | Anchi Cheng | </pre> |
| 25 | |||
| 26 | h2. instruments.cfg |
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| 27 | |||
| 28 | 7 | Anchi Cheng | cs is *constant for sperical abberation* |
| 29 | |||
| 30 | For Tecnai series: |
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| 31 | 2 | Anchi Cheng | <pre> |
| 32 | [TEM] |
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| 33 | class: tecnai.Tecnai |
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| 34 | cs: 2.0e-3 |
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| 35 | 1 | Anchi Cheng | </pre> |
| 36 | |||
| 37 | 7 | Anchi Cheng | For Titan: |
| 38 | <pre> |
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| 39 | [TEM] |
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| 40 | class: tecnai.Tecnai |
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| 41 | cs: 2.7e-3 |
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| 42 | </pre> |
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| 43 | 1 | Anchi Cheng | |
| 44 | 7 | Anchi Cheng | For Krios (different compustage) |
| 45 | <pre> |
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| 46 | [TEM] |
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| 47 | class: tecnai.Krios |
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| 48 | cs: 2.7e-3 |
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| 49 | </pre> |
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| 50 | |||
| 51 | 2 | Anchi Cheng | h2. Testing with pyscope |
| 52 | 3 | Anchi Cheng | |
| 53 | 2 | Anchi Cheng | In python command |
| 54 | <pre> |
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| 55 | 8 | Anchi Cheng | from pyscope import tecnai |
| 56 | 1 | Anchi Cheng | t = tecnai.Tecnai() |
| 57 | 7 | Anchi Cheng | t.getMagnification() |
| 58 | </pre> |
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| 59 | |||
| 60 | or for Krios |
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| 61 | <pre> |
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| 62 | 8 | Anchi Cheng | from pyscope import tecnai |
| 63 | 7 | Anchi Cheng | t = tecnai.Krios() |
| 64 | 2 | Anchi Cheng | t.getMagnification() |
| 65 | </pre> |
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| 66 | |||
| 67 | 6 | Anchi Cheng | You should get the current magnification at the microscope when the main viewing screen is up |
| 68 | 5 | Anchi Cheng | |
| 69 | 11 | Anchi Cheng | h2. Trouble Shooting |
| 70 | |||
| 71 | [[unable to initializ Tecnai interface error]] |
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| 72 | |||
| 73 | 5 | Anchi Cheng | h2. Programs to open before Leginon Client: None |