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FEI TecnaiTitan installation specifics » History » Revision 9

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Anchi Cheng, 07/29/2014 09:07 PM


FEI TecnaiTitan installation specifics

Extra Package and Installation

TEM Scripting or Tecnai Scripting Request this when purchasing the microscope Required
TomMoniker Scripting Should come with TEM Scripting Required
Low Dose Server Library Should come with the microscope if low dose kit was purchased Required only if you want to use low dose kit with Leginon's Manual Application

Run updatecom.py

  • From a command line window:
    cd C:\python27\Lib\site-packages\pyscope
    C:\python27\python.exe updatecom.py
  • The output sould contain
    initializing TOM Moniker done.
    

    and EITHER ONE of these outputs. The other one would get an error which you can ignore.
    initializing TEM Scripting done.
    initializing Tecnai Scripting done.
    

instruments.cfg

cs is constant for sperical abberation

For Tecnai series:

[TEM]
class: tecnai.Tecnai
cs: 2.0e-3

For Titan:

[TEM]
class: tecnai.Tecnai
cs: 2.7e-3

For Krios (different compustage)

[TEM]
class: tecnai.Krios
cs: 2.7e-3

Testing with pyscope

In python command

from pyscope import tecnai
t = tecnai.Tecnai()
t.getMagnification()

or for Krios

from pyscope import tecnai
t = tecnai.Krios()
t.getMagnification()

You should get the current magnification at the microscope when the main viewing screen is up

Programs to open before Leginon Client: None

Updated by Anchi Cheng over 10 years ago · 9 revisions