Falcon-Orius Combination Installation Notes » History » Version 5
Anchi Cheng, 06/06/2014 08:10 AM
1 | 1 | Anchi Cheng | h1. Falcon-Orius Combination Installation Notes |
---|---|---|---|
2 | 2 | Anchi Cheng | |
3 | 3 | Anchi Cheng | h2. Install 32 bit versions of the usual Python stuff at python 2.7 |
4 | |||
5 | 2 | Anchi Cheng | h2. Instruments.cfg |
6 | |||
7 | <pre> |
||
8 | [Falcon Camera] |
||
9 | class:tia.TIA_Falcon |
||
10 | zplane: 50 |
||
11 | width: 4096 |
||
12 | height: 4096 |
||
13 | |||
14 | [Orius] |
||
15 | 4 | Anchi Cheng | class:gatan.Gatan() |
16 | 2 | Anchi Cheng | zplane:49 |
17 | width: 2048 |
||
18 | height: 2048 |
||
19 | 1 | Anchi Cheng | </pre> |
20 | 4 | Anchi Cheng | |
21 | * Note that the class name for Gatan DM controlled camera depends on the number of cameras. Ask us if you have more than one and need to find out which is which. |
||
22 | 5 | Anchi Cheng | |
23 | h2. Setup |
||
24 | |||
25 | * Set camera configuration to give the [[Leginon Image Orientation|standard Leginon orientation]]. |
||
26 | |||
27 | h2. Testing with pyscope |
||
28 | |||
29 | h2. Trouble shooting ( DO these tests on the camera computer): |
||
30 | |||
31 | h3. For Falcon camera: |
||
32 | |||
33 | In python command |
||
34 | <pre> |
||
35 | form pyscope import tia |
||
36 | g = tia.TIA_Falcon() |
||
37 | g.setExposureTime(200) |
||
38 | g.getImage() |
||
39 | </pre> |
||
40 | |||
41 | You should get a bunch of numbers in a numpy array. Also, a window should show up in TIA's acquisition gui with the name pyscope |
||
42 | |||
43 | h3. For Orius (controlled through Gatan DM: |
||
44 | |||
45 | In python command |
||
46 | <pre> |
||
47 | form pyscope import tia |
||
48 | g = gatan.Gatan() |
||
49 | g.setExposureTime(200) |
||
50 | g.getImage() |
||
51 | </pre> |
||
52 | |||
53 | You should get a bunch of numbers in a numpy array. |
||
54 | |||
55 | |||
56 | h2. Programs to open before Leginon Client: Gatan DiM and TIA. |