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How does Leginon Name the Files » History » Revision 2

Revision 1 (Amber Herold, 04/23/2010 08:54 AM) → Revision 2/8 (Amber Herold, 04/27/2010 12:24 PM)

h1. How does Leginon Name the Files 



 Leginon image files are typically named 
 09mar16a_atlas1_00005gr_00003sq_00001hl_v1_00002en.mrc 


 This name includes 
 * sessionname: 09mar16a 


 * grid atlas label: atlas1 


 * target number in the target list: 00005; 00003; 00001; 00002 


 * presetname with which the image is aquired: gr; sq; hl; en 


 * target version: v1 





 Since Leginon always defines target on an image, and an image is acquired at the 
 location of the target offsets from the parent image of the target, a family tree is 
 estabilished. The filename therefore carries this family tree of the multi-scaled imaging. 
 * Grid atlas label is always unique in the session. When robotic grid 
 insertion/extration or Grid Entry node class is used for large-scale 
 screening, the atlas label is replaced by the grid label, unique within the 
 project, and the insertion number. 


 * Each target in the target list an Acquisition node class or subclass 
 receives has a unique number. Ocassionally a target in the list is out of 
 range of the goniometer or is aborted for various reasons before acquired. 
 The filename will therefore skip the number. 


 * When drift is declared, a new version of the target is obtained through 
 the node of TransformManager class, therefore the image acquired using that 
 target carries the version number to distinguish it from the 
 original. 


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 [[Why does the first Grid Image Not Numbered 00001?|Why does the first Grid Image Not Numbered 00001? >]]  

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