Leginon

h1. How to Update from v3.2 (Instrument Windows Computer)

h2. Preparation

You will need these myami subpackages from the branch you want from our git repository.

|_.Name:|_.Purpose:|

| leginon|modular TEM image acquisition|

| pyami|general functions|

| sinedon|database interaction|

| pyscope|microscope control and monitoring|

| imageviewer|image viewing for tomography|

h2. No internet access - copy from linux Leginon workstation the python files.

If your Windows computer has no access to internet, copy from your linux processing server the git clone of myami super package of the right branch for the installation which you used to upgrade there.

See [[Download_Appion_Files|Acquiring NRAMM GIT Repository files]] for different examples and match the repository with what you do on the Linux side.

*OR*

h2. With internet access

h3. Install Git-for-Windows

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h3. Clone the proper branch from git repository

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h2. Install

h3. Move the cloned folder according to your environment variable PYTHONPATH if you use that during the original installation.

*OR*

h3. Install to default python site-packages

* Start a command line Window from Start Menu

* Install the package in each folder with commands such as

<pre>cd path_to\myami-VERSION\myami\leginon

c:\\python27\python.exe setup.py install</pre>

Then continue with the other packages, replacing leginon with the package name. See the packages listed above for the complete list.

h2. Configure

h1. FEI scopes

tecnai.py is now renamed to fei.py and requires a configuration file.

h2. [[setup fei.cfg]]

h1. GatanK2Summit

Compare pyscope/dmsem.cfg.template with your active dmsem.cfg There are additional configuration that you may want to add.