How to Update from v32 (Linux) » History » Version 1
Anchi Cheng, 08/23/2017 03:44 PM
| 1 | 1 | Anchi Cheng | h1. How to Update from v32 (Linux) |
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| 3 | h1. Upgrade processing server |
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| 5 | h2. Download myami-beta source code |
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| 6 | |||
| 7 | <pre> |
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| 8 | git clone -b myami-beta http://emg.nysbc.org/git/myami myami-beta |
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| 9 | </pre> |
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| 11 | h2. Install Appion/Leginon Packages |
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| 13 | h3. Install all the myami python packages _except appion_ using the following script: |
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| 15 | <pre> |
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| 16 | cd /your_download_area |
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| 17 | cd myami-beta |
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| 18 | sudo ./pysetup.sh install |
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| 19 | </pre> |
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| 20 | |||
| 21 | That will install each package, and report any failures. To determine the cause of failure, see the generated log file "pysetup.log". If necessary, you can enter a specific package directory and run the python setup command manually. For example, if sinedon failed to install, you can try again like this: |
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| 23 | <pre> |
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| 24 | cd sinedon |
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| 25 | sudo python setup.py install |
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| 26 | </pre> |
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| 28 | h3. Move leginon.cfg/instruments.cfg/sinedon.cfg if it was saved with the old installation. In general, the installation would have put it in /etc/myami. Therefore, you do not have to do anything. |
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| 29 | |||
| 30 | Run this script to find out where it was: |
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| 31 | <pre> |
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| 32 | cd /your_download_area/myami/leginion/ |
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| 33 | ./configcheck.py |
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| 34 | </pre> |
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| 35 | If the script can not find leginon.cfg, and you found a copy of leginon.cfg in $PYTHONSITEPKG/leginon/config from the last installation, move that leginon.cfg to $PYTHONSITEPKG/leginon. |
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| 37 | h1. Upgrade web server |
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| 38 | |||
| 39 | Rename your current myamiweb at the document root of the web server to something else as a backup. |
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| 41 | h2. install the 3.2 version of pyami as it is done on processing server. |
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| 42 | |||
| 43 | h3. restart redux server |
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| 44 | |||
| 45 | h2. Install updated Web viewers and tools |
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| 47 | See [[Install the Web Interface]] section in Complete Installation Chapter to put the new myamiweb tools to document root for the web server. There is no need to run WebToolSetupWizard, however. See below. |
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| 49 | h2. Copy config.php from your older myamiweb backup to the new myamiweb. |
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| 51 | h2. Import new versions of Leginon Applications |
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| 53 | Old version of MSI Leginon applications will still run but without new feature. Use the Web administrator tool to import new version as shown in [[Steps_involved_in_the_installation]] Step for "Import Applications". |
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| 56 | ______ |
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| 58 | [[How_to_Update_from_v32_(Instrument_Windows_Computer)| How to Update from v3.2 (Instrument Computer) >]] |