Leginon

h1. How to Update from v33 (Instrument Windows Computer)

h2. Preparation

You will need these myami subpackages from the branch you want from our git repository.

|_.Name:|_.Purpose:|

| leginon|modular TEM image acquisition|

| pyami|general functions|

| myami_test|test suite that is called before starting leginon|

| sinedon|database interaction|

| pyscope|microscope control and monitoring|

| imageviewer|image viewing for tomography|

h2. No internet access - copy from linux Leginon workstation the python files.

If your Windows computer has no access to internet, copy from your linux processing server the git clone of myami super package of the right branch for the installation which you used to upgrade there.

See [[Download_Appion_Files|Acquiring NRAMM GIT Repository files]] for different examples and match the repository with what you do on the Linux side.

*OR*

h2. With internet access

h3. Clone the proper branch from git repository.  You will want myami-3.4

{{include(git_for_windows_cloning)}}

h2. Install

h3. Move the cloned folder according to your environment variable PYTHONPATH if you use that during the original installation.

*OR*

h3. Install to default python site-packages

* Start a command line Window from Start Menu

* Install the package in each folder (must starts with pyami)

<pre>cd path_to\myami-VERSION\myami\pyami

c:\\python27\python.exe setup.py install</pre>

Then continue with the other packages, replacing pyami with the package name. See the packages listed above for the complete list.

h2. Configure

[[locate global config directory on Windows]]

h1. FEI scopes

h2. fei.cfg

Compare yours_git_clone\pyscope\fei.cfg.template with your active fei.cfg There are additional configuration that you may want to add.  Especially if you have Falcon 3.

h1. GatanK2Summit

Compare pyscope/dmsem.cfg.template with your active dmsem.cfg There are additional configuration that you may want to add.