JEOL 1230 installation specifics » History » Version 3
Anchi Cheng, 03/12/2016 01:15 AM
1 | 1 | Anchi Cheng | h1. JEOL 1230 installation specifics |
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3 | Implementation for using Leginon on JEOL1230 is developed at New York Structural Biology Center directed by David Stokes |
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5 | The communication is through Serial Port using jeol1230.py and jeol1230lib.py included in Leginon's pyscope subpackage. |
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7 | There is only one case of installation. Without original instruction, please contact Leginon team if trying this. |
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9 | h3. Install 32-bit version of myami package on the associated camera computer |
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11 | * Instead of installing myami package on JEOL scope-controlling PC, the access to JEOLCOM usually work through the computer controlling the digital camera, regardless of the camera manufacturer. |
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13 | * In addition, the installation is limited to 32-bit version. |
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15 | h2. instruments.cfg |
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17 | [scope] |
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18 | class: jeol1230.Jeol1230 |
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19 | cs: 2e-3 |
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21 | h2. Testing with pyscope |
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23 | In python command |
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24 | <pre> |
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25 | from pyscope import jeol1230 |
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26 | t =jeol1230.Jeol1230() |
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27 | t.getMagnification() |
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28 | </pre> |
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30 | You should get the current magnification at the microscope at the film camera position |
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31 | 2 | Anchi Cheng | |
32 | 3 | Anchi Cheng | h2. Calibrations |
33 | 2 | Anchi Cheng | |
34 | We do not know if additional calibration is required. The scale calibration done with JEOLCOM scopes is hard coded at the moment. Let us know if it does not work. |