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JEOL 1230 installation specifics » History » Version 3

Anchi Cheng, 03/12/2016 01:15 AM

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h1. JEOL 1230 installation specifics
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Implementation for using Leginon on JEOL1230 is developed at New York Structural Biology Center directed by David Stokes
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The communication is through Serial Port using jeol1230.py and jeol1230lib.py included in Leginon's pyscope subpackage.
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There is only one case of installation.  Without original instruction, please contact Leginon team if trying this.
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h3. Install 32-bit version of myami package on the associated camera computer
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* Instead of installing myami package on JEOL scope-controlling PC, the access to JEOLCOM usually work through the computer controlling the digital camera, regardless of the camera manufacturer.
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* In addition, the installation is limited to 32-bit version.
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h2. instruments.cfg
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[scope]
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class: jeol1230.Jeol1230
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cs: 2e-3
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h2. Testing with pyscope
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In python command
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<pre>
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from pyscope import jeol1230
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t =jeol1230.Jeol1230()
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t.getMagnification()
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</pre>
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You should get the current magnification at the microscope at the film camera position
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h2. Calibrations
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We do not know if additional calibration is required.  The scale calibration done with JEOLCOM scopes is hard coded at the moment.  Let us know if it does not work.