NCCAT Hardware » History » Version 1
Anchi Cheng, 01/29/2020 07:23 PM
| 1 | 1 | Anchi Cheng | h1. NCCAT Hardware (1/2020) |
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| 2 | |||
| 3 | This is still being built and will support |
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| 4 | |||
| 5 | 1 x Hitatchi HT7800 |
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| 6 | 1 x TFS Glacios with Ceta-D |
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| 7 | 3 x TFS Krios with Ceta, and Gatan K3 |
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| 8 | 1 x TFS Krios with Falcon 4 |
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| 9 | |||
| 10 | All microscopes use Leginon for data collection and Appion for preprocessing (defined as frame alignment/ctf estimation/particle picking) and on the same database server and together has ? web servers to serve the images for users to view and/or as Appion gui to construct the preprocessing commands. What is listed does not include infrastructure for 2D/3D classification and other post-processing. |
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| 11 | |||
| 12 | h2. Network |
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| 13 | |||
| 14 | All hardware mentioned below as well as the instruments are on a local 10 GB copper network. |
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| 15 | |||
| 16 | h2. Leginon control or processing work station |
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| 17 | |||
| 18 | One station per scope. For example, |
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| 19 | |||
| 20 | CPU 8 x Intel i7-6700 @ 3.40GHz |
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| 21 | MemoryL 16 GB |
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| 22 | Storage: 50G HDD |
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| 23 | |||
| 24 | |||
| 25 | h2. Database server |
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| 26 | |||
| 27 | Dell R730 with (2) Intel E5-2689 3.1GHz, lOCore CPUs, |
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| 28 | Memory: 128GB of RAM, |
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| 29 | Storage: (2) 120GB HDD, (1) 800GB SSD |
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| 30 | |||
| 31 | h2. Web server |
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| 32 | |||
| 33 | Internet accessible: for use from outside the building |
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| 34 | * CPU: 8 x Intel Xeon L5410 @ 2.33GHz |
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| 35 | * Memory: 8 GB + 8 GB swap |
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| 36 | |||
| 37 | h2. Frame processing server (One per microscope) |
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| 38 | |||
| 39 | h3. K2/Falcon 4 |
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| 40 | |||
| 41 | An ingestion or buffer server to process frames before it goes to gpfs primary storage. This is reserved to the person using the scope. |
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| 42 | |||
| 43 | {{include(NRAMM buffer server hardware)}} |
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| 44 | |||
| 45 | h2. Primary Storage |
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| 46 | |||
| 47 | BEGFS ? pB |