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Preparation before Using v2x Routinely » History » Revision 12

Revision 11 (Anchi Cheng, 04/04/2011 11:01 PM) → Revision 12/15 (Anchi Cheng, 05/26/2011 03:40 PM)

h1. Preparation before Using v2.x Routinely 

 h2. Did you [[Perform [[TEM_Scripting_Beam_Tilt_Calibration]] for your FEI microscope?    Don't forget it! 

 h2. [[Applications|Import new applications from your myamiweb administration page]] if desired. 

 * Calibrations (2.0) application contains a new node with various imaging options useful for coma-free alignment required before calibrate Leginon fore automated coma-free alignment. 

 h2. Start Leginon and [[Bright and Dark reference images|reacquire all gain references]]. 

 * Old dark and bright references can not be used with the new version. 

 h2. If you have chosen to enable the [[appion:What does User Authentication do to myamiweb|myamiweb login feature]] during web server upgrade, you have to go through the following steps to make it usable to individual Leginon user in the way you specified: 

 # Go to http://yourhost/myamiweb page 
 # Log in as administrator.    As default during the upgrade, a password identical to the username was temporarily assigned so that you can login. 
 # Change the user profile of the administrator and change the password so that it is not so obvious. 
 # Check profile of each Leginon user group at    'http://yourhost/myamiweb/addgroup.php'. Add groups and/or reassign group privilege if desired. 
 # Check profile of each Leginon user at 'http://yourhost/myamiweb/user.php'.    Reassign to a different group if desired. 
 # Click on the project icon to [[Go to project tools page|go to project management tool page]] 
 # For each existing project, click on the project name to [[Edit an existing project]] 
 ## Click on the *Edit* link besides the owner list to add new owners for the project. 
 ## For each user who does not belong to a group with administrator privilege but requires access to the particular project, add he/she as an owner. 
 ## Return to project summary page by clicking on "View Project" icon 
 # Have each Leginon user log in to http://yourhost/myamiweb and add their e-mail address to his/her profile and modify the password to something better than the default.    The password in the database is encrypted.    The e-mail address is used to send the user his/her forgotten password. 

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 [[How_to_Update_from_v16_(Microscope_Windows_Computer)|< How to Update from v1.6 (Microscope Windows Computer)]] 


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