Restarting procedure to continue data acquisition » History » Version 6
Anchi Cheng, 11/28/2012 03:38 PM
1 | 1 | Anchi Cheng | h1. Restarting procedure to continue data acquisition |
---|---|---|---|
2 | |||
3 | |||
4 | # main> restart Leginon by 'start-leginon.py' |
||
5 | |
||
6 | # Leginon Setup Wizard> Select user and returning sesson and "Start" the program. |
||
7 | |
||
8 | # Leginon/Application> select the application used to run. Select the scope and the main launcher, and then launch the application. |
||
9 | |
||
10 | # If a simple application such as "Manual" is used, just continue what you were doing. |
||
11 | |
||
12 | # If some "MSI" application is used and Leginon did not crash during queue processing, do the following to continue: |
||
13 | |
||
14 | ** Leginon/Square Targeting/Toolbar/Tiles!http://emg.nysbc.org/software/leginon/images/icons/tiles.png!> select the current mosaic from the pull-down list by checking the ID and label, and then "Load" it. |
||
15 | |
||
16 | ** Leginon/Square Targeting/Toolbar> "Submit" !http://emg.nysbc.org/software/leginon/images/icons/play.png! the target list that is loaded with the atlas. Leginon will check the status of the target acquisition and processing and pick it up from where it was left off. |
||
17 | |
||
18 | # If some "MSI" application is used and Leginon crash during queue processing, do the following at the node where the targets from its queue you wish to continue process. |
||
19 | |
||
20 | Leginon/XXX Targeting/Toolbar> click on the "Submit the queued target" !http://emg.nysbc.org/software/leginon/images/icons/send_queue_out.png!. |
||
21 | 2 | Anchi Cheng | |
22 | 3 | Anchi Cheng | h2. None of the above will resume data collection if all targets are done or abort by the user. Select new ones on the atlas for more data collection. |
23 | |||
24 | 2 | Anchi Cheng | |
25 | ______ |
||
26 | |||
27 | 6 | Anchi Cheng | [[Aborting targets that are not yet being processed|< Aborting targets that are not yet being processed]] | [[General operation problems|General operation problems >]] |
28 | 2 | Anchi Cheng | |
29 | ______ |