Leginon

h1. Setup Diffraction mode TEM instrument

On microscope PC, with myami-ed git branch of installation

h2. Edit Instruments.cfg used by leginon.  Typically in C:\Program Files\myami\

Add diffraction instrument as another tem.  The class name is your normal instrument, for example, Glacios, with Diffr prefix.  Therefore, add

<pre>

[difftem]

class: fei.DiffrGlacios

cs: 2.7e-3

</pre>

h2. Add items required for the instrument and workflow to your fei.cfg.  This should have exists with instruments.cfg

Decide where you will put all the AutoIt script executable.  For example: C:\Program Files\AutoIt3\

Copy the items from your pyscope/fei.cfg.template to make sure you have the right syntax.

h3. Under [camera] module, add

<pre>

AUTOIT_TUI_ACQUIRE_EXE_PATH = C:\Program Files\Autoit3\TuiAcquire.exe

AUTOIT_TIA_EXPORT_SERIES_EXE_PATH = C:\Program Files\Autoit3\TiaExportSeries.exe

AUTOIT_TIA_EXPORTED_DATA_DIR = C:\Users\supervisor\Documents\FEI\TIA\Exported Data

</pre>

h3. Add [beamstop] module and items needed at the end of some module.

<pre>

[beamstop]

AUTOIT_IN_EXE_PATH =  C:\Program Files\Autoit3\BeamstopIn.exe

AUTOIT_OUT_EXE_PATH = C:\Program Files\Autoit3\BeamstopOut.exe

</pre>