Project

General

Profile

Setup and Calibration for jeolcfg » History » Revision 9

Revision 8 (Anchi Cheng, 04/01/2015 11:17 AM) → Revision 9/26 (Anchi Cheng, 04/02/2015 05:40 PM)

h1. Setup and Calibration for jeol.cfg 

 All setup and calibrations are done on the computer that has access to JEOL's External COM through temext.dll. 

 h2. Copy from pyscope/jeol.cfg.template to pyscope/jeol.cfg 

 The current template is based on a JEM-3200FSC 

 h2. Modify [tem option] section in pyscope/jeol.cfg according to your scope 

 h3. Using PLA for image shift 

 Image shift is normally achieved with IS1.    However, PLA is a sometimes a better choice, especially if energy filter is involved. 

 h3. Lens Series within MAG1 and LOW MAG modes 

 There are distinct sets of objective and projection lens settings within MAG1 mode that gives 
 different scale and neutral values.    We assign each of these lens series (LS) numbers, starting at 1 at 
 the lowest mags. Similarly, we also named the lowest LOWMAG mode lens series LM1 and assign a 
 different deflector scale to them. 

 The order of magnifications is therefore roughly 

 <pre> 
 LM1->the rest of LOWMAG->LS1->LS2->LS3->the rest of MAG1 
 </pre> 

 * To simply the mapping of magnification to the projection modes, MAG1 will be used if a magnification 
 can be achieved by either LOWMAG and MAG1* 

 These four configurations like these therefore define the boundary of each lens series within the mode. 
 <pre> 
 LS1_MAG_MAX = 4000 5000 
 LS2_MAG_MAX = 25000 30000 
 LS3_MAG_MAX = 100000 
 LM1_MAG_MAX = 200 
 </pre> 

 h2. Run pyscope/scalecalibrator.py to get values for different items in jeol.cfg 

 With the main viewing screen down do these at the computer with temext.dll registered. 

 # Open pyscope/jeol.cfg with a text editor and leave it open so that you can enter values as you go. 
 # Double click pyscope/scalecalibrator.py to start it. 
 # The script will first make the scope go through all magnifications in LOWMAG and MAG1 range to determine valid magnifications. 
 # After choosing tem options, enter the magnifications at which to calibrate.    Make sure that you include at least one magnification in each lens series that you will use. 
 # Follow the instruction to shift each coil or mechanism by the amount indicated.    The distance between the major ticks of the linear scale bar on the main viewing screen corresponds to 1 cm at the film camera (i.e., nominal magnification)