Start Leginon at your main working station remotely » History » Version 10
Amber Herold, 06/23/2010 03:57 PM
| 1 | 1 | Amber Herold | h1. Start Leginon at your main working station remotely |
|---|---|---|---|
| 2 | |||
| 3 | 9 | Amber Herold | h3. 1 [[Set up for a new regular user|Set yourself up as a Leginon/Appion user]] |
| 4 | 1 | Amber Herold | |
| 5 | |||
| 6 | 9 | Amber Herold | h3. 2 Start the remote Leginon Client on the microscope |
| 7 | 1 | Amber Herold | |
| 8 | 7 | Anchi Cheng | [[Run Leginon Client on the Microscope Computer|Start the remote Leginon Client on the microscope]] as described in the previous section if you have not done so. For Tietz camera, this will need to be restarted every time you establish and then remove the connection to it. |
| 9 | 1 | Amber Herold | |
| 10 | 9 | Amber Herold | h3. 3 Start the main Leginon processing program |
| 11 | 1 | Amber Herold | |
| 12 | * start-leginon.py (From any directory for Linux) |
||
| 13 | |||
| 14 | 10 | Amber Herold | h3. 4 Select a session |
| 15 | |||
| 16 | * Leginon Setup Wizard> select "Create session" in session type if a new session is needed. |
||
| 17 | ** Fill in session name and comments. Comments will appear in Viewers |
||
| 18 | ** Select instrument and project. |
||
| 19 | *** Image path is automatically selected based on your [[Configure leginon.cfg|leginon.cfg]] file. This is the path under which a subdirectory will be created in the name of your session. If necessary, you can modify this base path. |
||
| 20 | 1 | Amber Herold | OR |
| 21 | 10 | Amber Herold | * Leginon Setup Wizard> Select a previous session you have created using the same instrument. |
| 22 | 1 | Amber Herold | |
| 23 | |||
| 24 | 10 | Amber Herold | h3. 5 Create or edit the list of remote client hosts names. The host on which you are running the main Leginon process does not need to be included in this list. |
| 25 | 9 | Amber Herold | |
| 26 | 1 | Amber Herold | |
| 27 | * Make sure that you click on "+" to add the client to the list when creating. Just have the name show up in the selection window is not enough!* |
||
| 28 | |||
| 29 | 10 | Amber Herold | h3. 6 Check your parameters: |
| 30 | 1 | Amber Herold | |
| 31 | |||
| 32 | 6 | Anchi Cheng | "Connect to clients" should list the client host(s) you have just edited. If it says "(no clients selected)", you need to go back to the last step and make sure you click on "+" after you make each host you want appear in the selection window. |
| 33 | 1 | Amber Herold | |
| 34 | |||
| 35 | 10 | Amber Herold | h3. 7 Make sure that the Leginon Client has been started on each of the host in your list before finishing the wizard. The host on which you are running the main Leginon process does not need to have a Leginon Client started. |
| 36 | 1 | Amber Herold | |
| 37 | |||
| 38 | 10 | Amber Herold | h3. 8 Choose "Finish" in the set up wizard to start the session. |
| 39 | 2 | Amber Herold | |
| 40 | |||
| 41 | |||
| 42 | ______ |
||
| 43 | |||
| 44 | [[Run Leginon Client on the Microscope Computer|< Run Leginon Client on the Microscope Computer]] |
||
| 45 | |||
| 46 | ______ |