Summary of this application¶

MSI-Edge uses a template matching of the Edge image for hole finding both in "Hole Targeting" and "Exposure Targeting".

See the previous chapter for general description of all MSI applications:

Pre-MSI Set-up: Prior to setting up Leginon for the day, make sure that Leginon has been previously set-up (this step is in case the ambitious user decides to proceed to this section for the first time and hasn't gone through all the calibrations...).

MSI preferences and configuration: The comprehensive MSI preferences and configuration example.

MSI Quick Start checklist: A short check list for users who are familiar with the application and have saved preferences.

MSI set-up in more details: The more complicated MSI Leginon application set-up that should be completed before collecting data.

MSI queuing option: Introduction to the queuing option.

Queuing Example 1 - Exposure Targeting: The setup and operation of queuing mode for large number of exposure targets and/or for avoiding accessing sq presets after initial acquisition and targeting.

Queuing Example 2 - Hole Targeting only: The setup and operation of queuing mode recommended for quick overall survey of rare hole targets in grid squares.

Queuing Example 3 - Both Exposure and Hole Targeting: Use this only after you are familiar with the queuing operation.

MSI Trouble shooting: This trouble shooting sections addresses some of the possible challenges a Leginon user may face while using the MSI application.

Edge Hole Finder Set-up >