Leginon

h2.  Python and Support Packages (Note that python 2.7 must be used to match window installers of myami modules):

You should generally be able to use the most recent versions of these packages that are available from their respective web sites.  Just be sure to always get the version that is compatible with Python 2.7.  However, you must use the exact version for numpy.  If you are having trouble with the most recent version, try to use the specific versions we include in http://emg.nysbc.org/projects/leginon/files

{{include(Windows External Package installers)}}

h2. (3.2 and earlier) SVN client used for check out from our repository

This is required for following this instruction. We have used Tortois SVN client.  Alternatively, you may copy the required NRAMM source files from another computer.

|_.Name:|_.Download site:|

|Tortoise SVN client| "http://tortoisesvn.tigris.org":http://tortoisesvn.tigris.org|

h2. (trunk) GIT client used for check out from our repository

We switched to git recently.  If you want to install the newest changes, you need to use the files from git repository.

h3. For 64-bit PC, you can clone our repository with

|_.Name:|_.Download site:|

|git for Windows| "https://git-for-windows.github.io":https://git-for-windows.github.io|

* During the installation, select "Checkout as-is, commit as-is" option at the step regarding automated translation of CRLF and LF line endings if you are a developer and may commit changes.

* Default is fine with the rest of the options.

h3. For 32-bit PC running XP or older Windows OS

We had trouble cloning the repository from 32-bit PC running XP.  You should just copy the cloned myami folder from another computer.

h2. Packages from NRAMM

Most of the subpackages from NRAMM are obtained through our svn repository.

h3. Check out SVN Source Files from the repository

Use your mouse to do the following

* Create a folder at your convenience to gather all download files. Let's call it myami-VERSION where VERSION would corresponds to your check version.  For example, myami-3.1 for 3.1 release

* Change directory into myami-VERSION

* Right-click the mouse botton in this directory window and select Tortoise svn

Checkout in the menu:

 !http://emg.nysbc.org/software/leginon/images/images/svnmenu.png!

* Set up svn checkout window like this but change shaded area according to the version you want and the destination.

* We recommend that you put the destination to myami-VERSION\myami so that it is easy to recognize in the future.

Note: the URL has changed to http://emg.nysbc.org/svn/myami/branches/myami-3.2

!svn_checkout.png!

See [[Download_Appion_Files|Acquiring NRAMM SVN Repository files]] for different examples and match the repository with what you do on the Linux side.

h3. Cloning git repository after version 3.2.

We recommend using git bash to do so which gives most freedom in configuration and so that you can use unix syntax.

* Right Click at the folder where it will contain your clone and choos "Git Bash Here" to start the shell window and type.

See [[Download_Appion_Files|Acquiring NRAMM SVN Repository files]] for different examples and match the repository with what you do on the Linux side.

h3. numextension windows installer

Because numextension and would require extra compilers if you build them yourself, we have created Windows installers for them for python 2.7 and made them available at /redmine/projects/leginon/files.

h3. These are the current Leginon python 2.7 compiled packages you should install by opening them on Windows.

{{include(Windows Myami Package installers)}}