issue on leginon tomography using the gatan K2 camera: error on correlate images
Added by Xing Zhang about 11 years ago
We try leginon tomography today using the gatan K2 camera, but got error and cannot continue. THe error message (see attachment) is:
"Retrying correlate image: int() argument must be a string or a number". Any idea?
Thanks a lot.
Replies (3)
RE: issue on leginon tomography using the gatan K2 camera: error on correlate images - Added by Anchi Cheng about 11 years ago
Yes,
I know this bug. Don't have time to fix it, yet. In the mean time, acquire as a square image that can be divided by 8 will avoid the error.
RE: issue on leginon tomography using the gatan K2 camera: error on correlate images - Added by Xing Zhang about 11 years ago
How can I change the image size in liginon? such as 3704x3704. I tried the "custom" in the camer configuration, but returned "invalid camera geometry".
RE: issue on leginon tomography using the gatan K2 camera: error on correlate images - Added by Anchi Cheng about 11 years ago
You changed it at the right place but might not be with the right values
I tried this combination and tomography ran.
Dimension: 3704 x 3704
Offset: 3,67
Binning 1 x 1
Dimension + Offset must be smaller than or equal to the camera size (3710 x 3838) to be valid.