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Bug #1134

closed

Can not select "manual" as preset in appionLoop functions when there are other presets in the session

Added by Anna-Clare Milazzo almost 14 years ago. Updated about 9 years ago.

Status:
Closed
Priority:
Normal
Category:
-
Start date:
01/12/2011
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.0.0
Show in known bugs:
No
Workaround:

Description

The session is 10nov03j and I was trying to run ACE2 on the images.
http://cronus3.scripps.edu/betamyamiweb/processing/runAce2.php?expId=8193
"manual" or "all" are not available presets.

Actions #1

Updated by Anchi Cheng almost 14 years ago

  • Subject changed from only one preset available for session 10nov03j to Can not select "manual" as preset in appionLoop functions when there are other presets in the session
  • Status changed from New to In Code Review
  • Target version set to Appion/Leginon Future Version
  • Affected Version changed from Appion/Leginon 2.1.0 to Appion/Leginon 2.0.0
  • Show in known bugs changed from No to Yes

"manual" is not really a preset in Leginon but a case in which there is no preset reference so the query for presets don't give it back.

r15273 fix the bug with a special search.

To allow the selection in myamiweb:

  • myamiweb/inc/leginon.inc add a function to check specifically whether there are manual images taken in the session
  • myamiweb/processing/inc/processing.inc uses the above function to add to the preset selection when manual images are included in the session

To allow manual as an option in appion script:

  • appion/appionlib/apDatabase.py use the different method to search for manual images
Actions #2

Updated by Anchi Cheng almost 14 years ago

  • Assignee changed from Anchi Cheng to Lauren Fisher

You can assign back to Anna-Clare to test.

Actions #3

Updated by Lauren Fisher almost 14 years ago

  • Status changed from In Code Review to In Test
  • Assignee changed from Lauren Fisher to Anna-Clare Milazzo
Actions #4

Updated by Anchi Cheng about 9 years ago

  • Status changed from In Test to Closed
Actions #5

Updated by Anchi Cheng about 9 years ago

  • Show in known bugs changed from Yes to No
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