Leginon

Here is an example using a test sesssion of mine on my own computer.

manualpicker.py --projectid=1 --preset=en --session=11feb05a --runname=manrun1 --rundir=/Users/acheng/testdata/appion/11feb05a/extract/manrun1 --no-rejects --no-wait --commit --reverse --limit=4 --continue --median=2 --lowpass=15 --highpass=0 --planereg --bin=4 --diam=200 --pixlimit=4.0 --shape=plus

... Time stamp: 11feb05w28
... Function name: manualpicker
... Appion directory: /Users/acheng/myami/appion
!!! WARNING: Using split database
Connected to database: 'ap1'
... Committing data to database
Traceback (most recent call last):
File "/Users/acheng/myami/appion/bin/manualpicker.py", line 605, in <module>
imgLoop = ManualPicker()
File "/Users/acheng/myami/appion/appionlib/particleLoop2.py", line 95, in init
appionLoop2.AppionLoop.__init__(self)
File "/Users/acheng/myami/appion/appionlib/appionLoop2.py", line 30, in init
appionScript.AppionScript.__init__(self, True)
File "/Users/acheng/myami/appion/appionlib/appionScript.py", line 84, in init
self.checkGlobalConflicts()
File "/Users/acheng/myami/appion/appionlib/particleLoop2.py", line 270, in checkGlobalConflicts
filterLoop.FilterLoop.checkGlobalConflicts(self)
File "/Users/acheng/myami/appion/appionlib/filterLoop.py", line 122, in checkGlobalConflicts
appionLoop2.AppionLoop.checkGlobalConflicts(self)
File "/Users/acheng/myami/appion/appionlib/appionLoop2.py", line 273, in checkGlobalConflicts
imgproject = apProject.getProjectIdFromSessionName(self.params['sessionname'])
File "/Users/acheng/myami/appion/appionlib/apProject.py", line 41, in getProjectIdFromSessionName
projectid = getProjectIdFromSessionData(sessiondata)
File "/Users/acheng/myami/appion/appionlib/apProject.py", line 21, in getProjectIdFromSessionData
apDisplay.printError("could not find project for session "+sessiondata['name'])
File "/Users/acheng/myami/appion/appionlib/apDisplay.py", line 56, in printError
raise Exception, colorString("\n * FATAL ERROR *\n"+text+"\n\a","red")
Exception:

• FATAL ERROR ***
  could not find project for session 11feb05a