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Bug #1516

closed

findem64.exe does not work on CentOS 6

Added by Anchi Cheng almost 13 years ago. Updated about 9 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Category:
-
Target version:
Start date:
01/11/2012
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 2.2.0 (trunk)
Show in known bugs:
No
Workaround:

Description

error while loading shared libraries: libgfortran.so.1: cannot open shared object file: No such file or directory

I've checked the two packages that it needs and both were installed by yum but this particular one is not anywhere. Found, for example, libgfortran.so.3.0.0 in /usr/lib64

Any suggestion?

I couldn't compile it from source, either. Make failed without useful error message, just that the resulting finem.exe was not found.

We will need to release next appion at CentOS 6. So we can't rely on the old compiled code any more.


Related issues 1 (0 open1 closed)

Related to Appion - Task #1513: CentOS 6 installation of myami 3.0 errorsClosedAnchi Cheng01/18/2012

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Actions #1

Updated by Neil Voss almost 13 years ago

  • Status changed from Assigned to In Test
  • Assignee changed from Neil Voss to Anchi Cheng

Yeah, because the library changed we need to compile it again for CentOS 6. The BINPATH variable was set wrong in the Makefile, see r16237.

Actions #2

Updated by Neil Voss almost 13 years ago

  • Status changed from In Test to In Code Review
Actions #3

Updated by Anchi Cheng almost 13 years ago

  • Status changed from In Code Review to In Test
  • Assignee changed from Anchi Cheng to Gang Cai

Gang,

Neil helped me solved the compiling problem with CentOS 6. It worked for me. Try to recompile with his change in myami/programs/findem and use the instruction in Compile_FindEM. You can then replace the one used by your system with the new exe file.

If you can update this redmine issue, let us know how it goes here by posing an update. Otherwise, send me e-mail.

Anchi

Actions #4

Updated by Anchi Cheng about 9 years ago

  • Status changed from In Test to Closed
  • Assignee changed from Gang Cai to Anchi Cheng
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