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Feature #215

closed

All SubStack programs should create a bad particle stack.

Added by Neil Voss over 14 years ago. Updated over 14 years ago.

Status:
Closed
Priority:
Normal
Assignee:
-
Category:
-
Target version:
Appion/Leginon 2.0.0
Start date:
03/16/2010
Due date:
% Done:

100%

Estimated time:

Description

SubStack should create a bad particle stack. This is useful is seeing which particles are removed.

subStack.py
alignSubStack.py
coranSubStack.py
equalViewsSubStack.py
jumperSubStack.py
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 #1

Updated by Neil Voss over 14 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Neil Voss to Amber Herold

Complete in r13174.

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 #2

Updated by Amber Herold over 14 years ago

Neil,
Can you add a test procedure?

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 #3

Updated by Amber Herold over 14 years ago

  • Assignee changed from Amber Herold to Neil Voss
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 #4

Updated by Neil Voss over 14 years ago

Run any of the above programs. A link to the bad particles should be provided in the stack summary box.

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 #5

Updated by Neil Voss over 14 years ago

  • Assignee changed from Neil Voss to Amber Herold

Any appion user can test this.

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 #6

Updated by Amber Herold over 14 years ago

  • Status changed from In Code Review to In Test
  • Assignee changed from Amber Herold to Pick-Wei Lau
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 #7

Updated by Neil Voss over 14 years ago

  • Target version set to Appion/Leginon 2.0.0
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 #8

Updated by Neil Voss over 14 years ago

  • Status changed from In Test to Assigned
  • Assignee changed from Pick-Wei Lau to Neil Voss

This is not working for alignSubStack.py

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 #9

Updated by Neil Voss over 14 years ago

  • Status changed from Assigned to Closed
  • Assignee deleted (Neil Voss)

I was mistaken a bad stack is only created if more than half the particles are good.

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 #10

Updated by Neil Voss over 14 years ago

  • % Done changed from 0 to 100
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