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Bug #238

closed

Tomo Alignment

Added by Erica Jacovetty over 14 years ago. Updated over 14 years ago.

Status:
Closed
Priority:
Normal
Category:
Web interface
Target version:
Start date:
03/22/2010
Due date:
% Done:

100%

Estimated time:
Affected Version:
Show in known bugs:
Workaround:

Description

Ran tomo alignments, tried both protomo and Imod for tomograms from session 10mar12a. I tried with tilt series 1. I ran it on guppy. It thinks they are complete, but there is no info and no alignment when I go to the completed page.

Actions #1

Updated by Anchi Cheng over 14 years ago

  • Category set to Web interface
  • Status changed from New to In Test
  • Assignee changed from Anchi Cheng to Amber Herold
  • % Done changed from 0 to 100

fixed it with a check for SQLtable exist. Wish there is a better way. Ref Revision r13256

Actions #2

Updated by Amber Herold over 14 years ago

  • Assignee changed from Amber Herold to Erica Jacovetty
Actions #3

Updated by Anchi Cheng over 14 years ago

Found that empty --exclude causes the tomomaker script to crash. Put in prevention measure at both webserver and python level. Refs. Revision r13662 May be related to this issue.

Actions #4

Updated by Neil Voss over 14 years ago

  • Target version set to Appion/Leginon 2.0.0
Actions #5

Updated by Erica Jacovetty over 14 years ago

  • Status changed from In Test to Closed

Everything is there now.

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