Feature #2419
closedoption to remove ddstack after aligned sum image is uploaded to database
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Description
Since movie stack is large. Some prefer not to store it especially since there is now agreement on what range of dose is best for high resolution.
Updated by Anchi Cheng over 11 years ago
- Status changed from New to Assigned
- Assignee changed from Anchi Cheng to Amber Herold
- Target version set to Appion/Leginon 3.0.0
r17738 uses --no-keepstack flag to remove any ddstack generated after it is used for alignment and generating aligned sum image to upload.
If the stack is needed later. run the same script under the same run but- remove --no-keepstack flag
- change --commit to --no-commit
- change --conitnue to --no-continue
Amber, please add this option to run makeDDRawFrameStack.php default should be not using it.
Updated by Amber Herold over 11 years ago
- Status changed from Assigned to In Code Review
- Assignee changed from Amber Herold to Anchi Cheng
Anchi,
I added this flag. For the future, if you have a choice to define flags without a dash "-" in the name, it would be better for clarity. The dash in "no-keepstack" is not parsed well by our javascript help file, so I need to use something else as the key in the GUI forms, which means I needed to override the forms default "buildCommand" function. It is not much extra code, but better to avoid it if possible in the future, or else figure out how to parse the dash in the javascript keys.
Updated by Amber Herold over 11 years ago
r17750 adds the help.js file...which I neglected to include in r17749.
Updated by Anchi Cheng about 11 years ago
- Status changed from In Code Review to Closed
code reviewed and tested.