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Feature #2430

closed

avoid making new refine stack if exists

Added by Anchi Cheng over 11 years ago. Updated over 10 years ago.

Status:
Closed
Priority:
Normal
Assignee:
Amber Herold
Category:
-
Target version:
Appion/Leginon 3.0.0
Start date:
07/19/2013
Due date:
% Done:

0%

Estimated time:

Description

To pass Euler angles from xmipp or eman refinement to Frealign requires the same stack to be referenced but prepare different refine stack since the former needs to be ctf corrected and phase-flipped. It is worth saving the time of redo makestack in prepRefineFrealign whenever a good refine stack is already made for another run.

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 #1

Updated by Anchi Cheng over 11 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Anchi Cheng to Amber Herold

r17762 added this.

To test: prepare with /processing/selectStackForm.php?expId=9318&method=frealign using stack id 51.

Amber, Relion might be able to use the same thing.

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 #2

Updated by Amber Herold over 11 years ago

  • Status changed from In Code Review to In Test

Reviewed. Good thinking, this will save a ton of time...

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 #3

Updated by Anchi Cheng over 11 years ago

  • Status changed from In Test to In Code Review

Found a bug. I forgot to copy stackpartorder.list in this case. It causes junk-sorted stack euler angles in the params.000.txt produced not matching the original.

r17792 is the fix. Missed the issue reference in the commit. Please review.

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 #4

Updated by Amber Herold over 10 years ago

  • Status changed from In Code Review to Closed
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