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Bug #3491

closed

ctffind4.py resmax larger than resmin

Added by Anchi Cheng about 9 years ago. Updated over 8 years ago.

Status:
Closed
Priority:
Normal
Assignee:
-
Category:
-
Target version:
-
Start date:
08/31/2015
Due date:
% Done:

0%

Estimated time:
Affected Version:
Appion/Leginon 3.2
Show in known bugs:
No
Workaround:

Description

Size of power spectrum to compute            [512] : 1024
Minimum resolution                          [30.0] : 50.0
Maximum resolution                           [5.0] : 100.0
Minimum defocus                           [5000.0] : 46708.0
Maximum defocus                          [50000.0] : 46713.0
Defocus search step                        [500.0] : 1000.0
Expected (tolerated) astigmatism           [100.0] : 923.2
Find additional phase shift?                  [no] : no

Total execution time : 0 seconds

2015-08-31 14:19:55: Fatal error (ctffind): Minimum resolution must be greater than maximum 
resolution

Related issues 1 (1 open — 0 closed)

Related to Appion - Bug #3960: CTF estimation resmax parameter get modified in a run mixed with and without bestctfIn Code ReviewAnchi Cheng02/17/2016

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 #2

Updated by Anchi Cheng about 9 years ago

  • Status changed from Assigned to In Code Review
  • Assignee changed from Anchi Cheng to Neil Voss

This is caused by a previous failed run gave the default goodness of fit of 100 A from

math.sqrt(ctfvalue['resolution_80_percent']*ctfvalue['resolution_50_percent'])

r19108 avoids the reassignment if it is too small.

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 #3

Updated by Neil Voss over 8 years ago

  • Status changed from In Code Review to Closed
  • Assignee deleted (Neil Voss)

superseded by issue #3960

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 #4

Updated by Neil Voss over 8 years ago

  • Related to Bug #3960: CTF estimation resmax parameter get modified in a run mixed with and without bestctf added
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